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Han Sang Kim Lab!

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Welcome to Exosome Cancer Metastasis (ECM) Lab @YONSEI UNIVERSITY! 

연세대학교 의과대학 엑소좀 암전이 연구실 입니다!

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석사학위 논문이 한빛사 논문에 선정되었습니다.


2012년 석사학위 주제로 어렵게 어렵게 논문 투고한 BMC Genomics 논문이

상위피인용 논문에 선정되었습니다.


앞으로 더 임팩트 있는 연구를 해 나가겠습니다.


김한상 (연세대학교 의과대학 세브란스병원 연세암병원 종양내과 대장암센터 간암센터 임상시험센터) | 한빛사논문 > 한빛사
www.ibric.org
김한상 (연세대학교 의과대학 세브란스병원 연세암병원 종양내과 대장암센터 간암센터 임상시험센터) | 한빛사논문 > 한빛사
Background In the postgenome era, a prediction of response to treatment could lead to better dose selection for patients in radiotherapy. To identify a radiosensitive gene signature and elucidate related signaling pathways, four different microarray experiments were reanalyzed before radiotherapy. Results Radiosensitivity profiling data using clonogenic assay and gene expression profiling data from four published microarray platforms applied to NCI-60 cancer cell panel were used. The survival fraction at 2 Gy (SF2, range from 0 to 1) was calculated as a measure of radiosensitivity and a linear regression model was applied to identify genes or a gene set with a correlation between expression and radiosensitivity (SF2). Radiosensitivity signature genes were identified using significant analysis of microarrays (SAM) and gene set analysis was performed using a global test using linear regression model. Using the radiation-related signaling pathway and identified genes, a genetic network was generated. According to SAM, 31 genes were identified as common to all the microarray platforms and therefore a common radiosensitivity signature. In gene set analysis, functions in the cell cycle, DNA replication, and cell junction, including adherence and gap junctions were related to radiosensitivity. The integrin, VEGF, MAPK, p53, JAK-STAT and Wnt signaling pathways were overrepresented in radiosensitivity. Significant genes including ACTN1, CCND1, HCLS1, ITGB5, PFN2, PTPRC, RAB13, and WAS, which are adhesion-related molecules that were identified by both SAM and gene set analysis, and showed interaction in the genetic network with the integrin signaling pathway. Conclusions Integration of four different microarray experiments and gene selection using gene set analysis discovered possible target genes and pathways relevant to radiosensitivity. Our results suggested that the identified genes are candidates for radiosensitivity biomarkers and that integrin signaling via adhesion molecules could be a target for radiosensitization.


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우수한 인재가 올 수만 있다면....



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서유라학생 한빛사 선정


축하합니다!

연구실도 3년간 3회 이상 한빛사로 되었습니다.


우수한 연구 인력과 함께 혁신적이고 도전적인 연구 하겠습니다.




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